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ZIRC
ZFIN ID: ZDB-GENE-110214-1
Gene Name: solute carrier family 25 member 38b
Gene Symbol: slc25a38b    Nomenclature History

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 6 Mapping Details/Browsers
Description: Predicted to have glycine transmembrane transporter activity. Involved in erythrocyte differentiation and hemoglobin biosynthetic process. Predicted to localize to the mitochondrion. Human ortholog(s) of this gene implicated in autosomal recessive pyridoxine-refractory sideroblastic anemia 2. Is expressed in blood; blood island; and posterior cardinal vein. Orthologous to human SLC25A38 (solute carrier family 25 member 38).
Genome Resources: Alliance (1),  Gene:571961 (1),  Ensembl(GRCz11):ENSDARG00000074533 (2)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa20631 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Sequence Targeting Reagents
    Targeting Reagent Created Alleles Publications
    MO1-slc25a38b N/A 2
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH slc25a38b HUMAN ORTHOLOG
    Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
    autosomal recessive pyridoxine-refractory sideroblastic anemia 2 Alliance Anemia, sideroblastic, 2, pyridoxine-refractory 205950
    DISEASE ASSOCIATED WITH slc25a38b VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process hemoglobin biosynthetic process (more)
    Cellular Component integral component of membrane (more)
    Molecular Function glycine transmembrane transporter activity (more)
    GO Terms (all 11)
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA slc25a38b-201 (1)    Ensembl 789
    slc25a38b-202 (1)    Ensembl 3947
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM slc25a38b No data available
    MARKER RELATIONSHIPS
    slc25a38b Contained in: [BAC] CH211-215G15 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001202458 (1)
    Genomic GenBank:CR925711 (1) 200688 bp Blast at MegaBLAST
    Polypeptide UniProtKB:P0CAT2 (1) 287 aa
    Sequence Clusters UniGene:94238 (1)
    Sequence Information (all 12)
    ORTHOLOGY for slc25a38b ( Chr: 6 )
    CITATIONS (21)