ZFIN ID: ZDB-GENE-110131-8
Gene Name: LHFPL tetraspan subfamily member 5a
Gene Symbol: lhfpl5a    Nomenclature History

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Previous Names: asn (1), astronaut (1)

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 11 Mapping Details/Browsers
Description: Involved in detection of mechanical stimulus involved in sensory perception and protein localization to cilium. Predicted to localize to plasma membrane. Human ortholog(s) of this gene implicated in autosomal recessive nonsyndromic deafness 67. Orthologous to human LHFPL5 (LHFPL tetraspan subfamily member 5).
Genome Resources: Alliance (1),  Gene:558325 (1),  Ensembl(GRCz11):ENSDARG00000045023 (2)
GENE EXPRESSION No data available
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
tm290d Point Mutation Unknown Unknown ENU
Sequence Targeting Reagents
Targeting Reagent Created Alleles Publications
CRISPR1-lhfpl5a
2
CRISPR2-lhfpl5a
3
MO1-lhfpl5a N/A 1
MO2-lhfpl5a N/A 1
PHENOTYPE
Data: 2 figures from 2 publications
Observed in:
DISEASE ASSOCIATED WITH lhfpl5a HUMAN ORTHOLOG
Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
autosomal recessive nonsyndromic deafness 67 Alliance Deafness, autosomal recessive 67 610265
DISEASE ASSOCIATED WITH lhfpl5a VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process detection of mechanical stimulus involved in sensory perception (more)
Cellular Component integral component of membrane (more)
GO Terms (all 6)
PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
TRANSCRIPTS
Type Name Length (nt) Analysis
mRNA lhfpl5a-201 (1)    Ensembl 1137
Browsers: NCBIEnsemblZFIN
INTERACTIONS AND PATHWAYS
ANTIBODIES No data available
PLASMIDS No data available
CONSTRUCTS WITH SEQUENCES FROM lhfpl5a
Construct Regulatory Regions Coding Sequences Species Tg Lines Publications
Tg(myo6b:EGFP-lhfpl5a) myo6b EGFPlhfpl5a Danio rerio 1 2
MARKER RELATIONSHIPS
lhfpl5a Contained in: [BAC] DKEY-190E14 (order this)
SEQUENCE INFORMATION
Type Accession # Length (nt/aa) Analysis
RNA RefSeq:XM_017358406 (1)
Genomic GenBank:CT583672 (1) 94177 nt
Select Tool
Polypeptide UniProtKB:A0A2R8QN41 (1) 226 aa
Sequence Information (all 6)
ORTHOLOGY for lhfpl5a ( Chr: 11 )
CITATIONS (27)