ZFIN ID: ZDB-GENE-101104-7
Gene Name: tumor necrosis factor receptor superfamily, member 18
Gene Symbol: tnfrsf18    Nomenclature History

{{control.fieldName}} Edit

ID: {{control.nomenID}}
{{control.fieldName}}:
Reason:
Comments:

Attributions

{{pub.zdbID}}
Previous Name: gitr (1)

Add new Alias

Alias
Attribution

Attributions for Alias: {{control.newAlias}}

{{pub.zdbID}}

Delete Alias:

(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 6 Mapping Details/Browsers
Description: Predicted to have tumor necrosis factor-activated receptor activity. Predicted to be involved in positive regulation of cell adhesion. Predicted to localize to external side of plasma membrane. Is expressed in gut; kidney; spleen; and thymus. Orthologous to human TNFRSF18 (TNF receptor superfamily member 18).
Genome Resources: Alliance (1),  Gene:571217 (1),  Ensembl(GRCz11):ENSDARG00000076800 (2)
GENE EXPRESSION
All Expression Data: Fig. 2 from Poulton et al., 2010
Wild-type Stages, Structures: Adult (90d-730d, breeding adult) to Adult (90d-730d, breeding adult)
 
High Throughput Expression: Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa33941 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Sequence Targeting Reagents
    Targeting Reagent Created Alleles Publications
    MO1-tnfrsf18 N/A 1
    MO2-tnfrsf18 N/A 1
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH tnfrsf18 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH tnfrsf18 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process negative regulation of apoptotic process (more)
    Cellular Component integral component of membrane (more)
    Molecular Function tumor necrosis factor-activated receptor activity (more)
    GO Terms (all 7)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA tnfrsf18-201 (1)    Ensembl 1540
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM tnfrsf18 No data available
    MARKER RELATIONSHIPS
    tnfrsf18 Contained in: [BAC] DKEY-20F24 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:NM_001113524 (1) 896 nt
    Genomic GenBank:BX950172 (1) 231139 nt Blast at MegaBLAST
    Polypeptide UniProtKB:E7F804 (1) 261 aa
    Sequence Information (all 11)
    ORTHOLOGY for tnfrsf18 ( Chr: 6 )
    CITATIONS (15)