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General Information
ZIRC
ZFIN ID: ZDB-GENE-101001-2
Gene Name: collagen, type IV, alpha 6
Gene Symbol: col4a6
Sequence Ontology ID : SO:0001217

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Attributions

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Previous Names: im:7147757, shiomaneki (1), sio

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(Including Attributions)
Location: Chr: 7 Mapping Details/Browsers
Nomenclature History
Note:
AUTOMATED DESCRIPTION
Predicted to have extracellular matrix structural constituent. Involved in axon extension involved in axon guidance and basement membrane organization. Predicted to localize to the extracellular  ...
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la026127Tg Transgenic Insertion Unknown Unknown DNA
rk18 Point Mutation Donor Splice Site of Intron 42 Unknown
sa7085 Point Mutation Unknown Splice Site ENU
sa34180 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa41014 Point Mutation Unknown Splice Site ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa41015 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • DISEASE ASSOCIATED WITH col4a6 HUMAN ORTHOLOG
    Disease Ontology Term OMIM Term OMIM Phenotype ID
    ?Deafness, X-linked 6 300914
    DISEASE ASSOCIATED WITH col4a6 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process axon extension involved in axon guidance (more)
    Cellular Component collagen trimer (more)
    Molecular Function extracellular matrix structural constituent (more)
    GO Terms (all 9)
    TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA col4a6-202 (1) 8255
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM col4a6 No data available
    MARKER RELATIONSHIPS
    col4a6 Encodes: [EST] IMAGE:7147757 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:XM_009303444 (1)
    Polypeptide UniProtKB:F1QYN1 (1) 1714 aa
    Sequence Clusters UniGene:115877 (1)
    Sequence Information (all 20)
    ORTHOLOGY for col4a6 ( Chr: 7 )
    CITATIONS (30)