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ZIRC
ZFIN ID: ZDB-GENE-100623-1
Gene Name: thrombospondin 2b
Gene Symbol: thbs2b    Nomenclature History

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 12 Mapping Details/Browsers
Description: Predicted to have calcium ion binding activity. Predicted to be involved in negative regulation of angiogenesis. Predicted to localize to the collagen-containing extracellular matrix. Orthologous to human THBS2 (thrombospondin 2).
Genome Resources: Alliance (1),  Gene:566325 (1),  Ensembl(GRCz11):ENSDARG00000073810 (2)
GENE EXPRESSION No data available
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la018204Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa6262 Point Mutation Unknown Premature Stop ENU
    sa35323 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa35324 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa45466 Point Mutation Unknown Splice Site ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH thbs2b HUMAN ORTHOLOG
    Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
    {Lumbar disc herniation, susceptibility to} 603932
    DISEASE ASSOCIATED WITH thbs2b VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process cell adhesion (more)
    Cellular Component extracellular region (more)
    Molecular Function calcium ion binding (more)
    GO Terms (all 5)
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA thbs2b-201 (1)    Ensembl 4419
    ncRNA thbs2b-002 (1)    Ensembl 859
    Browsers: NCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM thbs2b No data available
    MARKER RELATIONSHIPS
    thbs2b Contained in: [BAC] CH211-28P3 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:XM_689598 (1) 3627 bp
    Genomic GenBank:CR381684 (1) 184232 bp
    Select Tool
    Polypeptide UniProtKB:E7F1S4 (1) 1181 aa
    Sequence Clusters UniGene:95410 (1)
    Sequence Information (all 11)
    ORTHOLOGY for thbs2b ( Chr: 12 )
    CITATIONS (22)