ZFIN ID: ZDB-GENE-100215-3
Gene Name: solute carrier family 4 member 10a
Gene Symbol: slc4a10a    Nomenclature History

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Previous Name: slc4a10

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 11 Mapping Details/Browsers
Description: Predicted to have inorganic anion exchanger activity. Predicted to be involved in anion transport. Predicted to localize to the integral component of membrane. Is expressed in brain; eye; and spleen. Orthologous to human SLC4A10 (solute carrier family 4 member 10).
Genome Resources: Alliance (1),  Gene:798983 (1),  Ensembl(GRCz11):ENSDARG00000063133 (2)
GENE EXPRESSION
All Expression Data: Fig. 4 from Lee et al., 2011
Wild-type Stages, Structures: Adult (90d-730d, breeding adult) to Adult (90d-730d, breeding adult)
 
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa6192 Point Mutation Unknown Splice Site ENU
sa13492 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa21853 Point Mutation Unknown Premature Stop ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa35031 Point Mutation Unknown Splice Site ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa41786 Point Mutation Unknown Premature Stop ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa41787 Point Mutation Unknown Premature Stop ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH slc4a10a HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH slc4a10a VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process anion transport (more)
    Cellular Component integral component of membrane (more)
    Molecular Function anion transmembrane transporter activity (more)
    GO Terms (all 6)
    PROTEIN FAMILIES, DOMAINS AND SITES
    Type InterPro ID Name
    Family IPR003020 Bicarbonate transporter, eukaryotic
    Family IPR003024 Sodium bicarbonate cotransporter
    Domain IPR011531 Bicarbonate transporter, C-terminal
    Domain IPR013769 Band 3 cytoplasmic domain
    Homologous_superfamily IPR016152 Phosphotransferase/anion transporter
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA slc4a10a-202 (1)    Ensembl 6977
    Browsers: NCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM slc4a10a No data available
    MARKER RELATIONSHIPS
    slc4a10a Contained in: [BAC] DKEY-16N9 (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:XM_001335416 (1) 4157 bp
    Genomic GenBank:CR450841 (1) 263287 bp Blast at MegaBLAST
    Polypeptide UniProtKB:A0A2R8Q9J0 (1) 1116 aa
    Sequence Information (all 17)
    ORTHOLOGY for slc4a10a ( Chr: 11 )
    CITATIONS (16)