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General Information
ZIRC
ZFIN ID: ZDB-GENE-100119-2
Gene Name: collagen, type XXVII, alpha 1b
Gene Symbol: col27a1b
Sequence Ontology ID : SO:0001217

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(Including Attributions)
Location: Chr: 5 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have extracellular matrix structural constituent. Involved in bone mineralization; notochord morphogenesis; and skeletal system development. Predicted to localize to the extracellular  ...
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa14233 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa31484 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Targeting reagents:
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH col27a1b HUMAN ORTHOLOG
    Disease Ontology Term OMIM Term OMIM Phenotype ID
    Steel syndrome 615155
    DISEASE ASSOCIATED WITH col27a1b VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process bone mineralization (more)
    Cellular Component collagen trimer (more)
    Molecular Function extracellular matrix structural constituent (more)
    GO Terms (all 11)
    TRANSCRIPTS No data available
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM col27a1b No data available
    MARKER RELATIONSHIPS No data available
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001080575 (1) 4977 bp
    Genomic GenBank:CR769770 (1) 72616 bp
    Select Tool
    Polypeptide UniProtKB:A0MSJ1 (1) 1658 aa
    Sequence Clusters UniGene:115130 (1)
    Sequence Information (all 15)
    OTHER col27a1b GENE PAGES
  • Alliance (1)
  • Gene:560145 (1)
  • Ensembl(GRCz11):ENSDARG00000099930 (1)
  • ORTHOLOGY for col27a1b ( Chr: 5 )
    CITATIONS (13)