ZFIN ID: ZDB-GENE-091217-2
Gene Name: PDS5 cohesin associated factor B
Gene Symbol: pds5b    Nomenclature History

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 15 Mapping Details/Browsers
Description: Predicted to have DNA binding activity. Predicted to be involved in DNA repair and mitotic sister chromatid cohesion. Predicted to localize to chromatin and nucleus. Is expressed in several structures, including cranium; digestive system; nervous system; optic cup; and otic vesicle. Orthologous to human PDS5B (PDS5 cohesin associated factor B).
Genome Resources: Alliance (1),  Gene:565592 (1),  Ensembl(GRCz11):ENSDARG00000098897 (1)
Note: Represented by LOC565592 and ENSDARG00000061312 on LG15 in Zv8.
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa35942 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa35943 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Sequence Targeting Reagents
    Targeting Reagent Created Alleles Publications
    MO1-pds5b N/A 1
    TALEN1-pds5b
    1
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH pds5b HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH pds5b VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process mitotic sister chromatid cohesion (more)
    Cellular Component chromatin (more)
    Molecular Function DNA binding (more)
    GO Terms (all 5)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA pds5b-201 (1)    Ensembl 5401
    Browsers: NCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM pds5b No data available
    MARKER RELATIONSHIPS
    pds5b Contained in: [BAC] CH73-360F20 (1), CH211-250I4 (1), DKEY-26O16 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:XM_688861 (1) 5348 nt
    Genomic GenBank:CT027778 (1) 160888 nt
    Select Tool
    Polypeptide UniProtKB:A0A0R4IP12 (1) 1408 aa
    Sequence Information (all 9)
    ORTHOLOGY for pds5b ( Chr: 15 )
    CITATIONS (17)