ZFIN ID: ZDB-GENE-091204-356
Gene Name: DEP domain containing 5
Gene Symbol: depdc5
Sequence Ontology ID : SO:0000704

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Previous Name: si:dkey-106l3.5

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(Including Attributions)
Location: Chr: 10 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la027143Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa1323 Point Mutation Unknown Splice Site ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa9750 Point Mutation Unknown Splice Site ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • European Zebrafish Resource Center (EZRC) (order this)
  • sa21700 Point Mutation Unknown Premature Stop ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • European Zebrafish Resource Center (EZRC) (order this)
  • sa41618 Point Mutation Unknown Premature Stop ENU
    sa41619 Point Mutation Unknown Premature Stop ENU
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH depdc5 HUMAN ORTHOLOG
    Disease Ontology Term OMIM Term OMIM Phenotype ID
    Epilepsy, familial focal, with variable foci 604364
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process intracellular signal transduction (more)
    Cellular Component GATOR1 complex (more)
    Molecular Function CONTRIBUTES_TO GTPase activator activity (more)
    GO Terms (all 7)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR000591 (1)
  • InterPro:IPR011991 (1)
  • InterPro:IPR027244 (1)
  • PROSITE:PS50186 (1)
  • Pfam:PF00610 (1)
  • Pfam:PF12257 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA depdc5-001 (1) 5203
    ncRNA depdc5-002 (1) 515
    mRNA depdc5-003 (1) 446
    ncRNA depdc5-004 (1) 581
    mRNA depdc5-005 (1) 796
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM depdc5 No data available
    MARKER RELATIONSHIPS
    depdc5Contained in: [BAC] DKEY-106L3 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:XM_021479300 (1)
    Genomic GenBank:BX324123 (1) 158061bp
    Select Tool
    Polypeptide UniProtKB:E7EXM8 (1) 1603aa
    Sequence Information (all 18)
    OTHER depdc5 GENE PAGES
  • Alliance (1)
  • Gene:562995 (1)
  • VEGA:OTTDARG00000030902 (1)
  • Ensembl(GRCz10):ENSDARG00000078105 (1)
  • ORTHOLOGY for depdc5 (Chr: 10)
    CITATIONS (17)