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ZIRC
ZFIN ID: ZDB-GENE-091116-29
Gene Name: calpain 5b
Gene Symbol: capn5b
Sequence Ontology ID : SO:0000704

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Previous Name: si:dkey-163i6.4

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(Including Attributions)
Location: Chr: 21 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have calcium-dependent cysteine-type endopeptidase activity. Predicted to be involved in proteolysis. Predicted to localize to the cytoplasm. Orthologous to human CAPN5 (calpain 5).
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la014017Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • la021880Tg Transgenic Insertion Unknown Unknown DNA
    la028322Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa44967 Point Mutation Unknown Unknown ENU
    Targeting reagents:
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH capn5b HUMAN ORTHOLOG
    Disease Ontology Term OMIM Term OMIM Phenotype ID
    Vitreoretinopathy, neovascular inflammatory 193235
    DISEASE ASSOCIATED WITH capn5b VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process proteolysis (more)
    Cellular Component cytoplasm (more)
    Molecular Function calcium-dependent cysteine-type endopeptidase activity (more)
    GO Terms (all 6)
    TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA capn5b-201 (1) 1943
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM capn5b No data available
    MARKER RELATIONSHIPS
    capn5bContained in: [BAC] DKEY-163I6 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:XM_001345078 (1) 2571bp
    Genomic RefSeq:NW_018395349 (1) Blast at MegaBLAST
    Polypeptide UniProtKB:E7F7F1 (1) 642aa
    Sequence Information (all 13)
    ORTHOLOGY for capn5b (Chr: 21)
    CITATIONS (22)