ZFIN ID: ZDB-GENE-091116-25
Gene Name: spermatogenesis associated 13
Gene Symbol: spata13
Sequence Ontology ID : SO:0000704

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Previous Name: si:dkey-33c18.3

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(Including Attributions)
Location: Chr: 24 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have Rho guanyl-nucleotide exchange factor activity; predicted to be involved in regulation of Rho protein signal transduction; orthologous to human SPATA13 (spermatogenesis associated  ...
GENE EXPRESSION
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa13727 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa37887 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH spata13 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH spata13 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process regulation of Rho protein signal transduction (more)
    Molecular Function Rho guanyl-nucleotide exchange factor activity (more)
    GO Terms (all 2)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR000219 (1)
  • InterPro:IPR001452 (1)
  • InterPro:IPR001849 (1)
  • InterPro:IPR011993 (1)
  • InterPro:IPR035899 (1)
  • InterPro:IPR036028 (1)
  • PROSITE:PS50002 (1)
  • PROSITE:PS50003 (1)
  • PROSITE:PS50010 (1)
  • Pfam:PF00018 (1)
  • Pfam:PF00621 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA spata13-001 (1) 4480
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM spata13 No data available
    MARKER RELATIONSHIPS
    spata13Contained in: [BAC] DKEY-33C18 (1) (order this)
    spata13Encodes: [EST] wz11885
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:XM_005162741 (1) 4609bp
    Genomic GenBank:CR352265 (1) 170032bp
    Select Tool
    Polypeptide UniProtKB:A0A2R8QRI5 (1) 1278aa
    Sequence Clusters UniGene:160916 (1)
    Sequence Information (all 22)
    OTHER spata13 GENE PAGES
  • Alliance (1)
  • Gene:568426 (1)
  • VEGA:OTTDARG00000031934 (1)
  • Ensembl(GRCz11):ENSDARG00000062837 (2)
  • ORTHOLOGY for spata13 (Chr: 24)
    CITATIONS (13)