ZFIN ID: ZDB-GENE-091113-61
Gene Name: SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1 b
Gene Symbol: smarcad1b    Nomenclature History

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Previous Name: si:dkey-76p7.6

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 10 Mapping Details/Browsers
Description: Predicted to have DNA binding activity; DNA-dependent ATPase activity; and chromatin binding activity. Predicted to be involved in ATP-dependent chromatin remodeling and DNA double-strand break processing. Predicted to localize to nucleus and site of double-strand break. Human ortholog(s) of this gene implicated in adermatoglyphia. Orthologous to human SMARCAD1 (SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1).
Genome Resources: Alliance (1),  Gene:563175 (1),  Ensembl(GRCz11):ENSDARG00000073721 (2)
GENE EXPRESSION No data available
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa11433 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa21706 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa41628 Point Mutation Unknown Splice Site ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa41629 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Sequence Targeting Reagents
    Targeting Reagent Created Alleles Publications
    MO1-smarcad1b N/A 1
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH smarcad1b HUMAN ORTHOLOG
    Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
    adermatoglyphia Alliance Adermatoglyphia 136000
    Basan syndrome 129200
    Huriez syndrome 181600
    DISEASE ASSOCIATED WITH smarcad1b VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process ATP-dependent chromatin remodeling (more)
    Cellular Component site of double-strand break (more)
    Molecular Function ATP binding (more)
    GO Terms (all 16)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA smarcad1b-201 (1)    Ensembl 3464
    ncRNA smarcad1b-002 (1) 598
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM smarcad1b No data available
    MARKER RELATIONSHIPS
    smarcad1b Contained in: [BAC] DKEY-76P7 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:NM_001353868 (1)
    Genomic GenBank:BX927385 (1) 243665 nt Blast at MegaBLAST
    Polypeptide UniProtKB:E7F1C4 (1) 954 aa
    Sequence Information (all 12)
    ORTHOLOGY for smarcad1b ( Chr: 10 )
    CITATIONS (17)