ZFIN ID: ZDB-GENE-091015-2
Gene Name: protocadherin 1b
Gene Symbol: pcdh1b    Nomenclature History

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Previous Name: pcdh1 (1)

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 14 Mapping Details/Browsers
Description: Predicted to have calcium ion binding activity. Predicted to be involved in cell adhesion. Predicted to localize to integral component of plasma membrane. Is expressed in nervous system. Orthologous to human PCDH1 (protocadherin 1).
Genome Resources: Alliance (1),  Gene:572016 (1),  Ensembl(GRCz11):ENSDARG00000036175 (2)
PHENOTYPE No data available
DISEASE ASSOCIATED WITH pcdh1b HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH pcdh1b VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process cell adhesion (more)
Cellular Component integral component of membrane (more)
Molecular Function calcium ion binding (more)
GO Terms (all 7)
PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
TRANSCRIPTS
Type Name Length (nt) Analysis
mRNA pcdh1b-202 (1)    Ensembl 6717
Browsers: NCBIEnsemblZFIN
INTERACTIONS AND PATHWAYS
ANTIBODIES No data available
PLASMIDS No data available
CONSTRUCTS WITH SEQUENCES FROM pcdh1b No data available
MARKER RELATIONSHIPS
pcdh1b Contained in: [BAC] CH73-112A14 (1), CH211-125L3 (1), CH211-274G13 (1)
SEQUENCE INFORMATION
Type Accession # Length (nt/aa) Analysis
RNA RefSeq:XM_695671 (1) 5278 nt
Genomic RefSeq:NW_018394923 (1) Blast at MegaBLAST
Polypeptide UniProtKB:A0A140LGZ8 (1) 1093 aa
Sequence Information (all 21)
ORTHOLOGY for pcdh1b ( Chr: 14 )
CITATIONS (22)