Research
General Information
ZIRC
ZFIN ID: ZDB-GENE-091012-1
Gene Name: solute carrier family 22 (organic cation/carnitine transporter), member 5
Gene Symbol: slc22a5
Previous Name: si:ch211-25g7.3
Location: Chr: 21   Details
Nomenclature History
GENE EXPRESSION
All Expression Data: Fig. 3 from Nilsson et al., 2009
Wild-type Stages, Structures: Pharyngula:Prim-5 (24.0h-30.0h) to Pharyngula:Prim-5 (24.0h-30.0h)
  head, post-vent region
MUTANTS AND TARGETED KNOCKDOWNS
Alleles: sa12067
Knockdown reagents: MO1-slc22a5 (1)
PHENOTYPE
Data: Fig. 4 from Nilsson et al., 2009
Observed in: heme biosynthetic process, nucleate erythrocyte hemoglobin complex, nucleate erythrocyte

Phenotype of Human Orthologue OMIM Phenotype ID
Carnitine deficiency, systemic primary 212140
GENE ONTOLOGY
Ontology GO Term
Biological Process heme biosynthetic process (more)
Cellular Component integral component of membrane (more)
Molecular Function transmembrane transporter activity (more)
GO Terms (all 6)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR005828 (1)
  • InterPro:IPR005829 (1)
  • InterPro:IPR016196 (1)
  • InterPro:IPR020846 (1)
  • PROSITE:PS00216 (1)
  • PROSITE:PS50850 (1)
  • Pfam:PF00083 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA slc22a5-001 (1) 3729
    GENE PRODUCT DESCRIPTION
    ANTIBODIES No data available
    CONSTRUCTS WITH SEQUENCES FROM slc22a5 No data available
    SEGMENT (CLONE AND PROBE) RELATIONSHIPS
    slc22a5 Contained in: [BAC] CH211-25G7 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    Genomic GenBank:CU302316 (1) 166312 bp
    Select Tool
    Polypeptide UniProtKB:E7FAP2 (1) 549 aa
    OTHER slc22a5 GENE PAGES
  • VEGA:OTTDARG00000034898 (1)
  • Ensembl(Zv9):ENSDARG00000068603 (1)
  • ORTHOLOGY
      Evidence
    Species Symbol Chr (Position) Accession # AA CL
    Zebrafish slc22a5 21  
    Human SLC22A5 5 (5q23.3)
  • OMIM:603377
  • Gene:6584
  • Mouse Slc22a5 11 ( 32.02 cM)
  • MGI:1329012
  • Gene:20520
  • Orthology Details
    CITATIONS (9)