ZFIN ID: ZDB-GENE-090828-5
Gene Name: synaptopodin 2-like b
Gene Symbol: synpo2lb    Nomenclature History

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Previous Names: chap1 (1), im:7159270

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 12 Mapping Details/Browsers
Description: Predicted to have actin binding activity. Involved in cardiac muscle tissue development and skeletal muscle tissue development. Predicted to localize to Z disc; actin cytoskeleton; and nucleus. Is expressed in adaxial cell; cardiovascular system; musculature system; pectoral fin bud; and somite. Orthologous to human SYNPO2L (synaptopodin 2 like).
Genome Resources: Alliance (1),  Gene:100001241 (1),  Ensembl(GRCz11):ENSDARG00000078696 (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa15089 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa42039 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Sequence Targeting Reagents
    Targeting Reagent Created Alleles Publications
    MO1-synpo2lb N/A 1
    DISEASE ASSOCIATED WITH synpo2lb HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH synpo2lb VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process cardiac muscle tissue development (more)
    Cellular Component actin cytoskeleton (more)
    Molecular Function actin binding (more)
    GO Terms (all 7)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA synpo2lb-202 (1)    Ensembl 5501
    Browsers: NCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM synpo2lb No data available
    MARKER RELATIONSHIPS
    synpo2lb Contained in: [BAC] DKEY-287G12 (1) (order this)
    synpo2lb Encodes: [EST] IMAGE:7159270 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:XM_005156298 (1) 4415 nt
    Genomic GenBank:BX530026 (1) 190980 nt
    Select Tool
    Polypeptide UniProtKB:U3JAM7 (1) 1184 aa
    Sequence Information (all 12)
    ORTHOLOGY for synpo2lb ( Chr: 12 )
    CITATIONS (15)