ZFIN is now using GRCz12tu for Genomic Data
Gene
rph3ab
- ID
- ZDB-GENE-090706-3
- Name
- rabphilin 3A homolog (mouse), b
- Symbol
- rph3ab Nomenclature History
- Previous Names
- None
- Type
- protein_coding_gene
- Location
- Chr: 7 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to be involved in calcium-dependent activation of synaptic vesicle fusion and positive regulation of calcium ion-dependent exocytosis. Predicted to be active in neuron projection and postsynaptic membrane. Predicted to be extrinsic component of synaptic vesicle membrane. Orthologous to human RPH3A (rabphilin 3A).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- No data available
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Domain | IPR000008 | C2 domain |
| Domain | IPR001565 | Synaptotagmin |
| Domain | IPR010911 | Rab-binding domain |
| Domain | IPR017455 | Zinc finger, FYVE-related |
| Domain | IPR028698 | Rabphilin-3A, FYVE domain |
| Domain | IPR041282 | FYVE-type zinc finger |
| Domain | IPR047022 | Rabphilin/Doc2, first C2 domain |
| Family | IPR043566 | Rabphilin/Doc2/Noc2 |
| Homologous_superfamily | IPR011011 | Zinc finger, FYVE/PHD-type |
| Homologous_superfamily | IPR013083 | Zinc finger, RING/FYVE/PHD-type |
| Homologous_superfamily | IPR035892 | C2 domain superfamily |
Domain Details Per Protein
| Protein | Additional Resources | Length | C2 domain | C2 domain superfamily | FYVE-type zinc finger | Rab-binding domain | Rabphilin-3A, FYVE domain | Rabphilin/Doc2, first C2 domain | Rabphilin/Doc2/Noc2 | Synaptotagmin | Zinc finger, FYVE/PHD-type | Zinc finger, FYVE-related | Zinc finger, RING/FYVE/PHD-type |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| UniProtKB:A0A8M9QI83 | InterPro | 588 | |||||||||||
| UniProtKB:A0A140LH42 | InterPro | 589 | |||||||||||
| UniProtKB:A0AC58G1T7 | InterPro | 601 | |||||||||||
| UniProtKB:A0AC58G1U3 | InterPro | 602 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
rph3ab-201
(1)
|
Ensembl | 3,204 nt | ||
| mRNA |
rph3ab-202
(1)
|
Ensembl | 1,695 nt | ||
| mRNA |
rph3ab-203
(1)
|
Ensembl | 1,695 nt | ||
| mRNA |
rph3ab-204
(1)
|
Ensembl | 1,734 nt | ||
| mRNA |
rph3ab-205
(1)
|
Ensembl | 1,611 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers