Research
General Information
ZIRC
ZFIN ID: ZDB-GENE-090611-2
Gene Name: cyclic nucleotide gated channel alpha 3a
Gene Symbol: cnga3a
Previous Name: cnga3
Location: Chr: 6   Details
Nomenclature History
GENE EXPRESSION
All Expression Data: Fig. 1 from Tetreault et al., 2006
Wild-type Stages, Structures: Adult (90d-730d, breeding adult) to Adult (90d-730d, breeding adult)
  brain, heart, olfactory epithelium, ovary (all 6) expand
MUTANTS AND TARGETED KNOCKDOWNS
Mutant lines: 2 genotypes
Alleles: hu2132, sa20756
PHENOTYPE
Phenotype of Human Orthologue OMIM Phenotype ID
Achromatopsia-2 216900
GENE ONTOLOGY
Ontology GO Term
Biological Process ion transport (more)
Cellular Component integral component of membrane (more)
Molecular Function ion channel activity (more)
GO Terms (all 15)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR000595 (1)
  • InterPro:IPR005821 (1)
  • InterPro:IPR014710 (1)
  • InterPro:IPR018488 (1)
  • InterPro:IPR018490 (1)
  • PROSITE:PS00888 (1)
  • PROSITE:PS00889 (1)
  • PROSITE:PS50042 (1)
  • Pfam:PF00027 (1)
  • Pfam:PF00520 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA cnga3a-001 (1) 2807
    GENE PRODUCT DESCRIPTION
    ANTIBODIES No data available
    CONSTRUCTS WITH SEQUENCES FROM cnga3a No data available
    SEGMENT (CLONE AND PROBE) RELATIONSHIPS
    cnga3a Contained in: [BAC] DKEY-22G9 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:XM_005166084 (1) 2833 bp
    Genomic GenBank:CR388007 (1) 221983 bp Blast at MegaBLAST
    Polypeptide UniProtKB:F8W5H0 (1) 706 aa
    Sequence Clusters UniGene:92064 (1)
    Sequence Information (all 9)
    OTHER cnga3a GENE PAGES
  • Gene:567242 (1)
  • VEGA:OTTDARG00000034643 (1)
  • Ensembl(Zv9):ENSDARG00000070726 (1)
  • ORTHOLOGY
      Evidence
    Species Symbol Chr (Position) Accession # AA
    Zebrafish cnga3a 6  
    Human CNGA3 2 (2q11.2)
  • OMIM:600053
  • Gene:1261
  • Orthology Details
    CITATIONS (14)