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General Information
ZIRC
ZFIN ID: ZDB-GENE-090608-3
Gene Name: protocadherin 17
Gene Symbol: pcdh17
Sequence Ontology ID : SO:0001217

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(Including Attributions)
Location: Chr: 11 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have calcium ion binding activity. Involved in axon extension; axon guidance; and camera-type eye photoreceptor cell differentiation. Predicted to localize to the integral component of  ...
GENE EXPRESSION
All Expression Data: 21 figures from 4 publications
Wild-type Stages, Structures: Cleavage:16-cell (1.5h-1.75h) to Adult (90d-730d, breeding adult)
 
DISEASE ASSOCIATED WITH pcdh17 HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH pcdh17 VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process axon extension (more)
Cellular Component integral component of membrane (more)
Molecular Function calcium ion binding (more)
GO Terms (all 11)
TRANSCRIPTS
Type Name Length (bp) Analysis
mRNA pcdh17-201 (1) 5398
GENE PRODUCT DESCRIPTION No description available
INTERACTIONS AND PATHWAYS
ANTIBODIES No data available
PLASMIDS No data available
MARKER RELATIONSHIPS
pcdh17 Contained in: [BAC] CH211-107E16 (1) (order this), DKEY-15K16 (1) (order this), DKEYP-71H2 (1)
SEQUENCE INFORMATION
Type Accession # Length (bp/aa) Analysis
RNA RefSeq:NM_001160822 (1) 3414 bp
Genomic GenBank:CR589875 (1) 223329 bp Blast at MegaBLAST
Polypeptide UniProtKB:C4P342 (1) 1137 aa
Sequence Clusters UniGene:82829 (1)
Sequence Information (all 19)
ORTHOLOGY for pcdh17 ( Chr: 11 )
CITATIONS (21)