Gene

fgd5a

ID
ZDB-GENE-090428-3
Name
FYVE, RhoGEF and PH domain containing 5a
Symbol
fgd5a Nomenclature History
Previous Names
  • fgd5
  • zmp:0000000940
Type
protein_coding_gene
Location
Chr: 11 Mapping Details/Browsers
Description
Predicted to have Rho guanyl-nucleotide exchange factor activity. Predicted to localize to cytoplasm. Is expressed in blood island; cranial vasculature; and trunk vasculature. Orthologous to human FGD5 (FYVE, RhoGEF and PH domain containing 5).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
3 figures from 2 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With fgd5a Human Ortholog
No data available
Associated With fgd5a Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR000219 Dbl homology (DH) domain
Domain IPR000306 FYVE zinc finger
Domain IPR001849 Pleckstrin homology domain
Domain IPR017455 Zinc finger, FYVE-related
Family IPR051092 FYVE, RhoGEF and PH domain-containing
Homologous_superfamily IPR011993 PH-like domain superfamily
Homologous_superfamily IPR013083 Zinc finger, RING/FYVE/PHD-type
Homologous_superfamily IPR035899 Dbl homology (DH) domain superfamily
Domain Details Per Protein
Protein Length Dbl homology (DH) domain Dbl homology (DH) domain superfamily FYVE, RhoGEF and PH domain-containing FYVE zinc finger PH-like domain superfamily Pleckstrin homology domain Zinc finger, FYVE-related Zinc finger, RING/FYVE/PHD-type
UniProtKB:A0A8M9QLY3 1473
UniProtKB:A0A8M2B1Z4 1464
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA fgd5a-201 (1) Ensembl 8,971 nt
mRNA fgd5a-202 (1) Ensembl 8,830 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations