ZFIN ID: ZDB-GENE-090421-1
Gene Name: ankyrin repeat and KH domain containing 1
Gene Symbol: ankhd1
Location: Chr: 21   Details
Nomenclature History
GENE EXPRESSION
All Expression Data: Fig. 3 from Baraban et al., 2013
MUTANTS AND TARGETED KNOCKDOWNS
Knockdown reagents: MO1-ankhd1 (1)

Allele Type Mutagen Suppliers
la028332Tg Transgenic Insertion DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa10239 Point Mutation ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • European Zebrafish Resource Center (EZRC) (order this)
  • sa23949 Point Mutation ENU
    PHENOTYPE
    Data: text only from Friedrichs et al., 2009
    Observed in: atrium, heart contraction
    DISEASE ASSOCIATED WITH ankhd1 HUMAN ORTHOLOG No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process heart contraction (more)
    Molecular Function RNA binding (more)
    GO Terms (all 3)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR002110 (1)
  • InterPro:IPR004087 (1)
  • InterPro:IPR004088 (1)
  • InterPro:IPR020683 (1)
  • PROSITE:PS50084 (1)
  • PROSITE:PS50088 (1)
  • PROSITE:PS50297 (1)
  • Pfam:PF00013 (1)
  • Pfam:PF00023 (1)
  • Pfam:PF12796 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA ankhd1-001 (1) 8535
    GENE PRODUCT DESCRIPTION
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM ankhd1 No data available
    SEGMENT (CLONE AND PROBE) RELATIONSHIPS
    ankhd1 Contained in: [BAC] CH211-112G7 (order this), CH211-123O7 (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001199768 (1) 8455 bp
    Genomic GenBank:CR354613 179432 bp
    Select Tool
    Polypeptide UniProtKB:E9QEX9 (1) 2607 aa
    Sequence Clusters UniGene:7647 (1)
    Sequence Information (all 16)
    OTHER ankhd1 GENE PAGES
  • Gene:563327 (1)
  • VEGA:OTTDARG00000031195 (1)
  • Ensembl(Zv9):ENSDARG00000077860 (1)
  • ORTHOLOGY
      Evidence
    Species Symbol Chr (Position) Accession # AA CL
    Zebrafish ankhd1 21  
    Human ANKHD1 5 (5q31.3)
  • OMIM:610500
  • Gene:54882
  • Mouse Ankhd1 18 ( 19.46 cM)
  • MGI:1921733
  • Gene:108857
  • Orthology Details
    CITATIONS (15)