ZFIN ID: ZDB-GENE-090421-1
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Gene Name: ankyrin repeat and KH domain containing 1
Gene Symbol: ankhd1
Location: Chr: 21 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
All Expression Data: Fig. 3 from Baraban et al., 2013
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la028332Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
    • sa10239 Point Mutation Unknown Unknown ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
    • sa23948 Point Mutation Unknown Unknown ENU
    sa23949 Point Mutation Unknown Unknown ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
    • sa37325 Point Mutation Unknown Unknown ENU
    Targeting reagents: MO1-ankhd1 (1)
    PHENOTYPE
    Data: text only from Friedrichs et al., 2009
    Observed in: atrium, heart contraction
    DISEASE ASSOCIATED WITH ankhd1 HUMAN ORTHOLOGNo data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process heart contraction (more)
    Cellular Component cytoplasm (more)
    Molecular Function RNA binding (more)
    GO Terms (all 5)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR002110 (1)
  • InterPro:IPR004087 (1)
  • InterPro:IPR004088 (1)
  • InterPro:IPR020683 (1)
    		•
  • PROSITE:PS50084 (1)
  • PROSITE:PS50088 (1)
  • PROSITE:PS50297 (1)
    		•
  • Pfam:PF00013 (1)
  • Pfam:PF12796 (1)
    		•
    TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA ankhd1-001 (1) 8535
    Select Tool
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYSNo data available
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM ankhd1 No data available
    SEGMENT (CLONE AND PROBE) RELATIONSHIPS
    ankhd1Contained in: [BAC] CH211-112G7 (order this), CH211-123O7 (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001199768 (1) 8455bp
    Select Tool
    Genomic GenBank:CR354613 179432bp
    Select Tool
    Polypeptide UniProtKB:E9QEX9 (1) 2607aa
    Select Tool
    Sequence Clusters UniGene:7647 (1)
    Sequence Information (all 18)
    OTHER ankhd1 GENE PAGES
  • Gene:563327 (1)
  • VEGA:OTTDARG00000031195 (1)
  • Ensembl(GRCz10):ENSDARG00000077860 (1)
    • ORTHOLOGY for ankhd1 (Chr: 21)
    Species Symbol Chromosome Accession # Evidence
    Human ANKHD1 5
  • Gene:54882
  • OMIM:610500
  • HGNC:24714
    		•  Amino acid sequence comparison (1)
    Conserved genome location (synteny) (1)
    Mouse Ankhd1 18
  • MGI:1921733
  • Gene:108857
    		•  Conserved genome location (synteny) (1)
    Download Curated Orthology
    CITATIONS (16)