ZFIN ID: ZDB-GENE-090421-1
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Gene Name: ankyrin repeat and KH domain containing 1
Gene Symbol: ankhd1
Sequence Ontology ID : SO:0000704

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(Including Attributions)
Location: Chr: 21 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
All Expression Data: Fig. 3 from Baraban et al., 2013
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la028332Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
    • sa10239 Point Mutation Unknown Premature Stop ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • European Zebrafish Resource Center (EZRC) (order this)
    • sa23948 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
    • sa23949 Point Mutation Unknown Splice Site ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • European Zebrafish Resource Center (EZRC) (order this)
    • sa37324 Point Mutation Unknown Premature Stop ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • European Zebrafish Resource Center (EZRC) (order this)
    • sa37325 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
    • Targeting reagents: CRISPR1-ankhd1 (2), CRISPR2-ankhd1 (2), CRISPR3-ankhd1 (2), CRISPR4-ankhd1 (2), CRISPR5-ankhd1 (2) (all 11) expand
    PHENOTYPE
    Data: text only from Friedrichs et al., 2009
    Observed in: atrium, heart contraction
    DISEASE ASSOCIATED WITH ankhd1 HUMAN ORTHOLOGNo data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process heart contraction (more)
    Cellular Component cytoplasm (more)
    Molecular Function RNA binding (more)
    GO Terms (all 5)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR002110 (1)
  • InterPro:IPR004087 (1)
  • InterPro:IPR004088 (1)
  • InterPro:IPR020683 (1)
  • InterPro:IPR036612 (1)
  • InterPro:IPR036770 (1)
    		•
  • PROSITE:PS50088 (1)
  • PROSITE:PS50297 (1)
    		•
  • Pfam:PF00013 (1)
  • Pfam:PF12796 (1)
    		•
    TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA ankhd1-001 (1) 8535
    Select Tool
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM ankhd1 No data available
    MARKER RELATIONSHIPS
    ankhd1Contained in: [BAC] CH211-112G7 (order this), CH211-123O7 (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001199768 (1) 8455bp
    Select Tool
    Genomic GenBank:CR354613 179432bp
    Select Tool
    Polypeptide UniProtKB:E9QEX9 (1) 2607aa
    Select Tool
    Sequence Clusters UniGene:7647 (1)
    Sequence Information (all 19)
    OTHER ankhd1 GENE PAGES
  • Alliance (1)
  • Gene:563327 (1)
  • VEGA:OTTDARG00000031195 (1)
  • Ensembl(GRCz10):ENSDARG00000077860 (1)
    • ORTHOLOGY for ankhd1 (Chr: 21)
    CITATIONS (20)