ZFIN ID: ZDB-GENE-090313-77
Gene Name: si:ch211-202h22.7
Gene Symbol: si:ch211-202h22.7    Nomenclature History

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 1 Mapping Details/Browsers
Description: Predicted to localize to the integral component of membrane.
Genome Resources: Alliance (1),  Gene:100535203 (1),  Ensembl(GRCz11):ENSDARG00000073912 (2)

Nomenclature Note: This gene is derived from the zebrafish genome sequencing and annotation project. When more is known about the gene, the current nomenclature will be replaced with more traditional zebrafish gene nomenclature. The prefix 'si:' indicates that this gene is represented by annotated genomic sequence from the Sanger Institute.

GENE EXPRESSION No data available
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa2000 Point Mutation Unknown Premature Stop ENU
sa32783 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • zko1093a Small Deletion Unknown Unknown CRISPR
    Sequence Targeting Reagents
    Targeting Reagent Created Alleles Publications
    CRISPR1-si:ch211-202h22.7 1
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH si:ch211-202h22.7 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH si:ch211-202h22.7 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Cellular Component integral component of membrane (more)
    GO Terms (all 2)
    PROTEIN FAMILIES, DOMAINS AND SITES
    Type InterPro ID Name
    Domain IPR006629 LPS-induced tumour necrosis factor alpha factor
    Family IPR037519 LITAF domain containing protein
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA si:ch211-202h22.7-201 (1)    Ensembl 769
    Browsers: NCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM si:ch211-202h22.7 No data available
    MARKER RELATIONSHIPS
    si:ch211-202h22.7 Contained in: [BAC] CH211-202H22 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:XM_021477434 (1)
    Genomic GenBank:BX119918 (1) 141342 bp
    Select Tool
    Polypeptide UniProtKB:B8A4H1 (1) 146 aa
    Sequence Information (all 7)
    ORTHOLOGY for si:ch211-202h22.7 ( Chr: 1 )
    CITATIONS (12)