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General Information
ZIRC
ZFIN ID: ZDB-GENE-090313-386
Gene Name: SAM domain and HD domain 1
Gene Symbol: samhd1
Sequence Ontology ID : SO:0000704

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Previous Name: si:dkeyp-44b8.8

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(Including Attributions)
Location: Chr: 23 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have several functions, including dGTP binding activity, dGTPase activity, and nucleic acid binding activity; involved in regulation of innate immune response; predicted to localize to  ...
GENE EXPRESSION No data available
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa17793 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa24232 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Targeting reagents:
    DISEASE ASSOCIATED WITH samhd1 HUMAN ORTHOLOG
    Disease Ontology Term OMIM Term OMIM Phenotype ID
    Aicardi-Goutieres syndrome Aicardi-Goutieres syndrome 5 612952
    Chilblain lupus ?Chilblain lupus 2 614415
    DISEASE ASSOCIATED WITH samhd1 VIA EXPERIMENTAL MODELS
    Human Disease Fish Conditions Citations
    Aicardi-Goutieres syndrome AB + MO2-samhd1 standard conditions Kasher et al., 2015
    AB + MO1-samhd1 standard conditions Kasher et al., 2015
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process regulation of innate immune response (more)
    Cellular Component nucleus (more)
    Molecular Function dGTPase activity (more)
    GO Terms (all 30)
    TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA samhd1-201 (1) 3072
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM samhd1 No data available
    MARKER RELATIONSHIPS
    samhd1Contained in: [BAC] DKEYP-44B8 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001159933 (1) 2843bp
    Genomic GenBank:BX323461 (1) 169310bp
    Select Tool
    Polypeptide UniProtKB:F1R861 (1) 622aa
    Sequence Clusters UniGene:79209 (1)
    Sequence Information (all 12)
    ORTHOLOGY for samhd1 (Chr: 23)
    CITATIONS (16)