ZFIN ID: ZDB-GENE-090313-317
Gene Name: sorting nexin 8b
Gene Symbol: snx8b    Nomenclature History

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Previous Name: si:dkey-58j15.9

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 1 Mapping Details/Browsers
Description: Predicted to have phosphatidylinositol binding activity. Predicted to be involved in retrograde transport, endosome to Golgi. Orthologous to human SNX8 (sorting nexin 8).
Genome Resources: Alliance (1),  Gene:799225 (1),  Ensembl(GRCz11):ENSDARG00000078057 (1)
GENE EXPRESSION No data available
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa45065 Point Mutation Unknown Splice Site ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • zko261a Indel Unknown Unknown CRISPR
  • China Zebrafish Resource Center (CZRC) (order this)
  • zko261b Indel Unknown Unknown CRISPR
  • China Zebrafish Resource Center (CZRC) (order this)
  • Sequence Targeting Reagents
    Targeting Reagent Created Alleles Publications
    CRISPR1-snx8b 1
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH snx8b HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH snx8b VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process retrograde transport, endosome to Golgi (more)
    Molecular Function phosphatidylinositol binding (more)
    GO Terms (all 2)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA snx8b-201 (1)    Ensembl 2233
    Browsers: NCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM snx8b No data available
    MARKER RELATIONSHIPS
    snx8b Contained in: [BAC] DKEY-21J8 (1) (order this), DKEY-58J15 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:XM_009306530 (1)
    Genomic GenBank:BX569778 (1) 255895 nt Blast at MegaBLAST
    Polypeptide UniProtKB:A0A0R4IDN5 (1) 418 aa
    Sequence Information (all 12)
    ORTHOLOGY for snx8b ( Chr: 1 )
    CITATIONS (14)