ZFIN ID: ZDB-GENE-090313-189
Gene Name: si:dkey-157g16.6
Gene Symbol: si:dkey-157g16.6    Nomenclature History

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Previous Names: fc13c02, wu:fc13c02

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 23 Mapping Details/Browsers
Description: Predicted to have microtubule-severing ATPase activity. Predicted to be involved in cytoplasmic microtubule organization and regulation of double-strand break repair via homologous recombination. Predicted to localize to nucleus. Orthologous to human FIGNL2 (fidgetin like 2).
Genome Resources: Alliance (1),  Gene:561837 (1),  Ensembl(GRCz11):ENSDARG00000057062 (2)

Nomenclature Note: This gene is derived from the zebrafish genome sequencing and annotation project. When more is known about the gene, the current nomenclature will be replaced with more traditional zebrafish gene nomenclature. The prefix 'si:' indicates that this gene is represented by annotated genomic sequence from the Sanger Institute.

GENE EXPRESSION
High Throughput Expression: GEO (1) Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la022610Tg Transgenic Insertion Unknown Unknown DNA
la022611Tg Transgenic Insertion Unknown Unknown DNA
la028526Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa6739 Point Mutation Unknown Premature Stop ENU
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH si:dkey-157g16.6 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH si:dkey-157g16.6 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process cytoplasmic microtubule organization (more)
    Cellular Component nucleus (more)
    Molecular Function ATP binding (more)
    GO Terms (all 6)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA si:dkey-157g16.6-202 (1)    Ensembl 2505
    si:dkey-157g16.6-203 (1)    Ensembl 577
    ncRNA si:dkey-157g16.6-002 (1) 539
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM si:dkey-157g16.6 No data available
    MARKER RELATIONSHIPS
    si:dkey-157g16.6 Contained in: [BAC] CH73-42A22 (1), DKEY-157G16 (1) (order this)
    si:dkey-157g16.6 Encodes: [EST] fc13c02
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:NM_001214908 (1)
    Genomic RefSeq:NW_018395154 (1) Blast at MegaBLAST
    Polypeptide UniProtKB:E9QEA3 (1) 684 aa
    Sequence Information (all 14)
    ORTHOLOGY for si:dkey-157g16.6 ( Chr: 23 )
    CITATIONS (18)