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General Information
ZIRC
ZFIN ID: ZDB-GENE-090313-184
Gene Name: adaptor related protein complex 5 subunit sigma 1
Gene Symbol: ap5s1
Sequence Ontology ID : SO:0000704

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Previous Name: si:dkey-146d24.2

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(Including Attributions)
Location: Chr: 13 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to be involved in double-strand break repair via homologous recombination and endosomal transport; predicted to localize to the AP-type membrane coat adaptor complex; orthologous to human  ...
GENE EXPRESSION
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa22250 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH ap5s1 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH ap5s1 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process double-strand break repair via homologous recombination (more)
    Cellular Component AP-type membrane coat adaptor complex (more)
    GO Terms (all 6)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR029392 (1)
  • Pfam:PF15001 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    ncRNA ap5s1-003 (1) 642
    mRNA ap5s1-201 (1) 982
    ap5s1-203 (1) 449
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM ap5s1 No data available
    MARKER RELATIONSHIPS
    ap5s1Contained in: [BAC] DKEY-146D24 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001305568 (1)
    Genomic GenBank:CT573293 (1) 175498bp
    Select Tool
    Polypeptide UniProtKB:B8JKA7 (1) 196aa
    Sequence Clusters UniGene:85282 (1)
    Sequence Information (all 13)
    ORTHOLOGY for ap5s1 (Chr: 13)
    CITATIONS (13)