ZFIN ID: ZDB-GENE-090312-57
Gene Name: contactin 3a, tandem duplicate 2
Gene Symbol: cntn3a.2    Nomenclature History

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Previous Name: si:ch211-273a21.1

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 23 Mapping Details/Browsers
Description: Predicted to have cell-cell adhesion mediator activity. Predicted to be involved in axon guidance; dendrite self-avoidance; and homophilic cell adhesion via plasma membrane adhesion molecules. Predicted to localize to axon and plasma membrane. Orthologous to human CNTN3 (contactin 3).
Genome Resources: Alliance (1),  Gene:100000688 (1),  Ensembl(GRCz11):ENSDARG00000013647 (1)
GENE EXPRESSION No data available
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa1280 Point Mutation Unknown Premature Stop ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa1947 Point Mutation Unknown Premature Stop ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa32427 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Sequence Targeting Reagents
    Targeting Reagent Created Alleles Publications
    CRISPR1-cntn3a.2
    1
    CRISPR2-cntn3a.2
    1
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH cntn3a.2 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH cntn3a.2 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process axon guidance (more)
    Cellular Component axon (more)
    Molecular Function cell-cell adhesion mediator activity (more)
    GO Terms (all 6)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA cntn3a.2-201 (1)    Ensembl 2786
    Browsers: NCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM cntn3a.2 No data available
    MARKER RELATIONSHIPS
    cntn3a.2 Contained in: [BAC] CH211-273A21 (1), DKEY-3K23 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:XM_001340803 (1) 4273 nt
    Genomic GenBank:CT573319 (1) 209901 nt Blast at MegaBLAST
    Polypeptide UniProtKB:F1R3I1 (1) 929 aa
    Sequence Information (all 7)
    ORTHOLOGY for cntn3a.2 ( Chr: 23 )
    CITATIONS (16)