ZFIN ID: ZDB-GENE-090312-214
Gene Name: si:dkey-26i13.7
Gene Symbol: si:dkey-26i13.7    Nomenclature History

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 1 Mapping Details/Browsers
Description: Predicted to have chondroitin 4-sulfotransferase activity. Predicted to be involved in chondroitin sulfate biosynthetic process. Predicted to localize to the Golgi membrane and integral component of membrane. Orthologous to human CHST12 (carbohydrate sulfotransferase 12).
Genome Resources: Alliance (1),  Gene:798013 (1),  Ensembl(GRCz11):ENSDARG00000092242 (1)

Nomenclature Note: This gene is derived from the zebrafish genome sequencing and annotation project. When more is known about the gene, the current nomenclature will be replaced with more traditional zebrafish gene nomenclature. The prefix 'si:' indicates that this gene is represented by annotated genomic sequence from the Sanger Institute.

GENE EXPRESSION No data available
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa18689 Point Mutation Unknown Premature Stop ENU
PHENOTYPE No data available
DISEASE ASSOCIATED WITH si:dkey-26i13.7 HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH si:dkey-26i13.7 VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process carbohydrate biosynthetic process (more)
Cellular Component Golgi apparatus (more)
Molecular Function sulfotransferase activity (more)
GO Terms (all 9)
PROTEIN FAMILIES, DOMAINS AND SITES
Type InterPro ID Name
Family IPR005331 Sulfotransferase
Family IPR018011 Carbohydrate sulfotransferase 8-10
TRANSCRIPTS
Type Name Length (nt) Analysis
mRNA si:dkey-26i13.7-201 (1)    Ensembl 1032
Browsers: NCBIEnsemblZFIN
INTERACTIONS AND PATHWAYS
ANTIBODIES No data available
PLASMIDS No data available
CONSTRUCTS WITH SEQUENCES FROM si:dkey-26i13.7 No data available
MARKER RELATIONSHIPS
si:dkey-26i13.7 Contained in: [BAC] DKEY-26I13 (1) (order this)
SEQUENCE INFORMATION
Type Accession # Length (bp/aa) Analysis
RNA RefSeq:XM_001338431 (1) 1094 bp
Genomic GenBank:BX569798 (1) 215607 bp Blast at MegaBLAST
Polypeptide UniProtKB:E9QBV9 (1) 343 aa
Sequence Information (all 4)
ORTHOLOGY for si:dkey-26i13.7 ( Chr: 1 )
CITATIONS (13)