ZFIN ID: ZDB-GENE-090311-7
Gene Name: HECT and RLD domain containing E3 ubiquitin protein ligase 5.4
Gene Symbol: herc5.4    Nomenclature History

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Previous Names: her56.4 (1), si:ch211-281g13.5 (1)

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 1 Mapping Details/Browsers
Description: Predicted to have ubiquitin-protein transferase activity. Orthologous to human HERC5 (HECT and RLD domain containing E3 ubiquitin protein ligase 5) and HERC6 (HECT and RLD domain containing E3 ubiquitin protein ligase family member 6).
Genome Resources: Alliance (1),  Gene:100148091 (1),  Ensembl(GRCz11):ENSDARG00000074052 (2)
GENE EXPRESSION No data available
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa25661 Point Mutation Unknown Splice Site ENU
sa32762 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH herc5.4 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH herc5.4 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process protein ubiquitination (more)
    Molecular Function transferase activity (more)
    GO Terms (all 3)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA si:ch211-281g13.5-201 (1)    Ensembl 3165
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM herc5.4 No data available
    MARKER RELATIONSHIPS
    herc5.4 Contained in: [BAC] CH211-281G13 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:NM_001145631 (1)
    Genomic GenBank:BX321880 (1) 144139 nt
    Select Tool
    Polypeptide UniProtKB:B8A4S7 (1) 992 aa
    Sequence Information (all 12)
    ORTHOLOGY for herc5.4 ( Chr: 1 )
    CITATIONS (15)