ZFIN ID: ZDB-GENE-090311-43
Gene Name: eph receptor A6
Gene Symbol: epha6    Nomenclature History

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Previous Name: si:ch211-247c17.1

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 1 Mapping Details/Browsers
Description: Predicted to have transmembrane-ephrin receptor activity. Predicted to be involved in axon guidance; positive regulation of kinase activity; and transmembrane receptor protein tyrosine kinase signaling pathway. Predicted to localize to integral component of plasma membrane; neuron projection; and receptor complex. Orthologous to human EPHA6 (EPH receptor A6).
Genome Resources: Alliance (1),  Gene:100005538 (1),  Ensembl(GRCz11):ENSDARG00000022971 (2)
GENE EXPRESSION No data available
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la021135Tg Transgenic Insertion Unknown Unknown DNA
sa13485 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa38274 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa39638 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa39639 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • zko635a Small Deletion Unknown Unknown CRISPR
  • China Zebrafish Resource Center (CZRC) (order this)
  • Sequence Targeting Reagents
    Targeting Reagent Created Alleles Publications
    CRISPR1-epha6 1
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH epha6 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH epha6 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process phosphorylation (more)
    Cellular Component integral component of membrane (more)
    Molecular Function ATP binding (more)
    GO Terms (all 20)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA epha6-202 (1)    Ensembl 638
    epha6-203 (1)    Ensembl 5632
    Browsers: NCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM epha6 No data available
    MARKER RELATIONSHIPS
    epha6 Contained in: [BAC] CH211-176A2 (1), CH211-247C17 (1), DKEY-24D16 (1) (order this), DKEY-24H22 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:XM_005159930 (1) 4761 nt
    Genomic GenBank:BX901972 (1) 212798 nt Blast at MegaBLAST
    Polypeptide UniProtKB:F6P3V1 (1) 1001 aa
    Sequence Information (all 23)
    ORTHOLOGY for epha6 ( Chr: 1 )
    CITATIONS (22)