ZFIN ID: ZDB-GENE-090306-4
Gene Name: mediator complex subunit 16
Gene Symbol: med16
Sequence Ontology ID : SO:0000704

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Previous Names: fc22c09, fc29h12, lppr3b, wu:fc22c09, wu:fc29h12

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(Including Attributions)
Location: Chr: 11 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to be involved in positive regulation of transcription, DNA-templated; predicted to localize to the mediator complex; orthologous to human MED16 (mediator complex subunit 16).
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [IMAGE:7136982]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la017682Tg Transgenic Insertion Unknown Unknown DNA
sa14925 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa38833 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH med16 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH med16 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process positive regulation of transcription, DNA-templated (more)
    Cellular Component mediator complex (more)
    Molecular Function transcription coactivator activity (more)
    GO Terms (all 4)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR001680 (1)
  • InterPro:IPR017986 (1)
  • InterPro:IPR021665 (1)
  • InterPro:IPR036322 (1)
  • PROSITE:PS50082 (1)
  • PROSITE:PS50294 (1)
  • Pfam:PF11635 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA med16-201 (1) 3147
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM med16 No data available
    MARKER RELATIONSHIPS
    med16Contained in: [BAC] DKEY-9K12 (1) (order this)
    med16Encodes: [EST] fc22c09, fc29h12, IMAGE:7136982 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001199872 (1) 3043bp
    Genomic GenBank:BX000430 (1) 181640bp
    Select Tool
    Polypeptide UniProtKB:E7F602 (1) 847aa
    Sequence Clusters UniGene:74490 (1)
    Sequence Information (all 21)
    OTHER med16 GENE PAGES
  • Alliance (1)
  • Gene:570199 (1)
  • VEGA:OTTDARG00000035599 (1)
  • ORTHOLOGY for med16 (Chr: 11)
    CITATIONS (19)