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ZIRC
ZFIN ID: ZDB-GENE-090218-29
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Gene Name: melanoma cell adhesion molecule a
Gene Symbol: mcama
Sequence Ontology ID : SO:0000704

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Previous Names: im:7151111, im:7163338, zmp:0000001063

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(Including Attributions)
Location: Chr: 5 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to localize to the integral component of membrane. Orthologous to human MCAM (melanoma cell adhesion molecule).
GENE EXPRESSION
Directly Submitted Expression Data: 6 figures (17 images) from Thisse et al., 2004 [IMAGE:7163338]
Wild-type Stages, Structures: Segmentation:1-4 somites (10.33h-11.66h) to Hatching:Long-pec (48.0h-60.0h)
 
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa18255 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
    • sa40577 Point Mutation Unknown Splice Site ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
    • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH mcama HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH mcama VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process biological_process (more)
    Cellular Component integral component of membrane (more)
    Molecular Function molecular_function (more)
    GO Terms (all 4)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR003598 (1)
  • InterPro:IPR003599 (1)
  • InterPro:IPR007110 (1)
  • InterPro:IPR013106 (1)
  • InterPro:IPR013151 (1)
  • InterPro:IPR013162 (1)
  • InterPro:IPR013783 (1)
  • InterPro:IPR036179 (1)
    		•
  • PROSITE:PS50835 (1)
    		•
  • Pfam:PF00047 (1)
  • Pfam:PF07686 (1)
  • Pfam:PF08205 (1)
    		•
    TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA mcama-201 (1) 5105
    Select Tool
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM mcama No data available
    MARKER RELATIONSHIPS
    mcamaContained in: [BAC] DKEY-70K11 (order this), DKEY-85K22 (order this)
    mcamaEncodes: [EST] IMAGE:7151111 (1) (order this), IMAGE:7163338 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:XM_009301889 (1)
    Select Tool
    Genomic GenBank:BX248506 (1) 230400bp Blast at MegaBLAST
    Polypeptide UniProtKB:F1QYT7 (1) 633aa
    Select Tool
    Sequence Clusters UniGene:42477 (1)
    Sequence Information (all 13)
    OTHER mcama GENE PAGES
  • Alliance (1)
  • Gene:566921 (1)
  • VEGA:OTTDARG00000042835 (1)
  • Ensembl(GRCz11):ENSDARG00000089643 (1)
    • ORTHOLOGY for mcama (Chr: 5)
    CITATIONS (13)