Gene

cacnb3b

ID

ZDB-GENE-090127-1

Name

calcium channel, voltage-dependent, beta 3b

Symbol

cacnb3b Nomenclature History

Previous Names

CAB3b (1)

Type

protein_coding_gene

Location

Chr: 23 Mapping Details/Browsers

Description

Predicted to enable high voltage-gated calcium channel activity. Predicted to be involved in calcium ion transport and chemical synaptic transmission. Predicted to act upstream of or within calcium ion transmembrane transport. Predicted to be located in cytoplasm. Predicted to be part of voltage-gated calcium channel complex. Is expressed in nervous system and otic vesicle. Orthologous to human CACNB3 (calcium voltage-gated channel auxiliary subunit beta 3).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

4 figures from 2 publications

Cross-Species Comparison

High Throughput Data

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

No data available

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With cacnb3b Human Ortholog

No data available

Associated With cacnb3b Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR008145	Guanylate kinase/L-type calcium channel beta subunit
Domain	IPR046937	Voltage-dependent L-type calcium channel subunit beta-1-4, N-terminal A domain
Family	IPR000584	Voltage-dependent calcium channel, L-type, beta subunit
Homologous_superfamily	IPR027417	P-loop containing nucleoside triphosphate hydrolase
Homologous_superfamily	IPR036028	SH3-like domain superfamily

Domain Details Per Protein

Protein	Additional Resources	Length	Guanylate kinase/L-type calcium channel beta subunit	P-loop containing nucleoside triphosphate hydrolase	SH3-like domain superfamily	Voltage-dependent calcium channel, L-type, beta subunit	Voltage-dependent L-type calcium channel subunit beta-1-4, N-terminal A domain
UniProtKB:A0A8M9PL84	InterPro	389

Transcripts

Genome Browsers

NCBI

Ensembl

ZFIN

Type	Name	Annotation Method	Has Havana Data	Length (nt)	Analysis
mRNA	cacnb3b-201 (1) Ensembl	Ensembl		1,128 nt	Select Tool ZFIN BLAST
mRNA	cacnb3b-202 (1) Ensembl	Ensembl		480 nt	Select Tool ZFIN BLAST

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations