ZFIN ID: ZDB-GENE-081104-81
Gene Name: RPGRIP1 like
Gene Symbol: rpgrip1l
Sequence Ontology ID : SO:0000704

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Previous Name: si:ch1073-301i20.1 (1)

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(Including Attributions)
Location: Chr: 25 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
fh322 Point Mutation Unknown Unknown ENU
fh323 Point Mutation Unknown Unknown ENU
la014760Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • rpgrip1l_unrecovered Point Mutation Unknown Unknown ENU
    sa3302 Point Mutation Unknown Premature Stop ENU
    sa6815 Point Mutation Unknown Premature Stop ENU
    sa10096 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa24730 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Targeting reagents:
    PHENOTYPE
    Data: Fig. 1 from Khanna et al., 2009
    Observed in:
    DISEASE ASSOCIATED WITH rpgrip1l HUMAN ORTHOLOG
    Disease Ontology Term OMIM Term OMIM Phenotype ID
    Joubert syndrome 7 Joubert syndrome 7 611560
    Meckel syndrome 5 Meckel syndrome 5 611561
    COACH syndrome 216360
    DISEASE ASSOCIATED WITH rpgrip1l VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process embryonic pattern specification (more)
    GO Terms (all 1)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR000008 (1)
  • InterPro:IPR021656 (1)
  • InterPro:IPR031139 (1)
  • InterPro:IPR035892 (1)
  • PROSITE:PS50004 (1)
  • Pfam:PF00168 (1)
  • Pfam:PF11618 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA rpgrip1l-001 (1) 3853
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM rpgrip1l No data available
    MARKER RELATIONSHIPS
    rpgrip1lContained in: [Fosmid] CH1073-301I20 (1) (order this), CH1073-435M20 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001246660 (1)
    Genomic GenBank:CU302251 (1) 37721bp
    Select Tool
    Polypeptide UniProtKB:G3K006 (1) 1258aa
    Sequence Clusters UniGene:111781 (1)
    Sequence Information (all 14)
    OTHER rpgrip1l GENE PAGES
  • Alliance (1)
  • Gene:557688 (1)
  • VEGA:OTTDARG00000027986 (1)
  • Ensembl(GRCz11):ENSDARG00000051754 (2)
  • ORTHOLOGY for rpgrip1l (Chr: 25)
    CITATIONS (23)