ZFIN ID: ZDB-GENE-081104-446
Gene Name: Rho guanine nucleotide exchange factor (GEF) 16
Gene Symbol: arhgef16
Sequence Ontology ID : SO:0000704

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Previous Name: si:dkeyp-100a1.3 (1)

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(Including Attributions)
Location: Chr: 8 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have Rho guanyl-nucleotide exchange factor activity; predicted to be involved in regulation of Rho protein signal transduction; orthologous to human ARHGEF16 (Rho guanine nucleotide  ...
GENE EXPRESSION
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa9734 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa17621 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH arhgef16 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH arhgef16 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process regulation of Rho protein signal transduction (more)
    Molecular Function Rho guanyl-nucleotide exchange factor activity (more)
    GO Terms (all 2)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR000219 (1)
  • InterPro:IPR001849 (1)
  • InterPro:IPR011993 (1)
  • InterPro:IPR035899 (1)
  • PROSITE:PS50003 (1)
  • PROSITE:PS50010 (1)
  • Pfam:PF00169 (1)
  • Pfam:PF00621 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA arhgef16-001 (1) 2231
    ncRNA arhgef16-002 (1) 760
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM arhgef16 No data available
    MARKER RELATIONSHIPS
    arhgef16Contained in: [BAC] CH211-120A12 (1) (order this), DKEY-77H17 (1) (order this), DKEYP-100A1 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001123283 (1)
    Genomic GenBank:BX000472 (1) 172174bp
    Select Tool
    Polypeptide UniProtKB:B0S4U0 (1) 606aa
    Sequence Clusters UniGene:78159 (1)
    Sequence Information (all 15)
    OTHER arhgef16 GENE PAGES
  • Alliance (1)
  • Gene:567180 (1)
  • VEGA:OTTDARG00000026952 (1)
  • Ensembl(GRCz11):ENSDARG00000077114 (2)
  • ORTHOLOGY for arhgef16 (Chr: 8)
    CITATIONS (15)