ZFIN ID: ZDB-GENE-081104-299
Gene Name: protocadherin 7b
Gene Symbol: pcdh7b    Nomenclature History

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Previous Names: sb:eu592, si:dkey-104n16.1 (1)

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 7 Mapping Details/Browsers
Description: Predicted to have calcium ion binding activity. Predicted to be involved in cell adhesion. Predicted to localize to integral component of plasma membrane. Is expressed in several structures, including epidermis; nervous system; neural plate; otic vesicle; and periderm. Orthologous to human PCDH7 (protocadherin 7).
Genome Resources: Alliance (1),  Gene:555504 (1),  Ensembl(GRCz11):ENSDARG00000060610 (2)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa2374 Point Mutation Unknown Premature Stop ENU
sa9185 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa14558 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH pcdh7b HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH pcdh7b VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process cell adhesion (more)
    Cellular Component integral component of membrane (more)
    Molecular Function calcium ion binding (more)
    GO Terms (all 7)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA pcdh7b-201 (1)    Ensembl 3304
    pcdh7b-202 (1)    Ensembl 4683
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM pcdh7b No data available
    MARKER RELATIONSHIPS
    pcdh7b Contained in: [BAC] DKEY-104N16 (1) (order this)
    pcdh7b Encodes: [EST] eu592 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:NM_001365653 (1)
    Genomic GenBank:CR318596 (1) 225081 nt Blast at MegaBLAST
    Polypeptide UniProtKB:A0A0H2UKU4 (1) 1242 aa
    Sequence Information (all 29)
    ORTHOLOGY for pcdh7b ( Chr: 7 )
    CITATIONS (22)