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ZIRC
ZFIN ID: ZDB-GENE-081104-267
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Gene Name: ATP/GTP binding protein 1
Gene Symbol: agtpbp1
Sequence Ontology ID : SO:0001217

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Previous Names: CCP1 (1), si:ch73-236b16.2

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(Including Attributions)
Location: Chr: 8 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have metallocarboxypeptidase activity and tubulin binding activity. Involved in T cell differentiation in thymus and chordate embryonic development. Predicted to localize to the cytosol;  ...
GENE EXPRESSION
All Expression Data: 4 figures from 3 publications
Wild-type Stages, Structures: Cleavage:4-cell (1.0h-1.25h) to Larval:Days 7-13 (168.0h-14d, 4.5mm, 8 teeth)
 
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
fcc301Gt Transgenic Insertion Unknown Splicing Variant DNA
la016425Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
    • sa2426 Point Mutation Unknown Premature Stop ENU
    sa8379 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
    • sa8921 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
    • sa17482 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
    • Targeting reagents:
    PHENOTYPE
    Data: 6 figures from 3 publications
    Observed in:
    DISEASE ASSOCIATED WITH agtpbp1 HUMAN ORTHOLOG
    Disease Ontology Term OMIM Term OMIM Phenotype ID
    Neurodegeneration, childhood-onset, with cerebellar atrophy 618276
    DISEASE ASSOCIATED WITH agtpbp1 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process chordate embryonic development (more)
    Cellular Component cytoplasm (more)
    Molecular Function metallocarboxypeptidase activity (more)
    GO Terms (all 22)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR000834 (1)
  • InterPro:IPR011989 (1)
  • InterPro:IPR016024 (1)
  • InterPro:IPR040626 (1)
  • Pfam:PF00246 (1)
  • Pfam:PF18027 (1)
  • EC:3.4.17.- (1)
    • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA agtpbp1-202 (1) 2294
    Select Tool
    cu694202.1-201 (1) 122
    Select Tool
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM agtpbp1 No data available
    MARKER RELATIONSHIPS
    agtpbp1 Contained in: [BAC] CH73-236B16 (1) (order this)
    [Fosmid] CH1073-483D10 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001024445 (1)
    Select Tool
    Genomic GenBank:CU468685 (1) 108280 bp
    Select Tool
    Polypeptide UniProtKB:A0A0R4IG37 (1) 1153 aa
    Select Tool
    Sequence Clusters UniGene:37774 (1)
    Sequence Information (all 20)
    OTHER agtpbp1 GENE PAGES
  • Alliance (1)
  • Gene:554164 (1)
  • VEGA:OTTDARG00000028927 (1)
  • VEGA:OTTDARG00000036921 (1)
  • Ensembl(GRCz11):ENSDARG00000105214 (1)
    • ORTHOLOGY for agtpbp1 ( Chr: 8 )
    CITATIONS (24)