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General Information
ZIRC
ZFIN ID: ZDB-GENE-081104-2
Gene Name: translocated promoter region a, nuclear basket protein
Gene Symbol: tpra
Sequence Ontology ID : SO:0001217

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Attributions

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Previous Name: si:ch1073-412d11.1

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(Including Attributions)
Location: Chr: 2 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to be a structural constituent of nuclear pore. Predicted to be involved in mitotic spindle assembly checkpoint. Predicted to localize to the nuclear pore. Orthologous to human TPR  ...
GENE EXPRESSION No data available
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la023496Tg Transgenic Insertion Unknown Unknown DNA
sa10563 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa19727 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa25104 Point Mutation Unknown Splice Site ENU
    sa32890 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa32891 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa32892 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa44527 Point Mutation Unknown Unknown ENU
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH tpra HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH tpra VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process protein import into nucleus (more)
    Cellular Component nuclear pore (more)
    Molecular Function structural constituent of nuclear pore (more)
    GO Terms (all 4)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR012929 (1)
  • Pfam:PF07926 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA tpra-201 (1) 7333
     Withdrawn Transcriptsextinct
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM tpra No data available
    MARKER RELATIONSHIPS
    tpra Contained in: [BAC] CH73-147D18 (1) (order this)
    [Fosmid] CH1073-26M24 (1) (order this), CH1073-202I11 (1) (order this), CH1073-412D11 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:XM_009298497 (1)
    Genomic GenBank:CU570979 (1) 105710 bp
    Select Tool
    Polypeptide UniProtKB:A0A0R4IYL8 (1) 2363 aa
    Sequence Clusters UniGene:121508 (1)
    Sequence Information (all 27)
    ORTHOLOGY for tpra ( Chr: 2 )
    CITATIONS (16)