ZFIN ID: ZDB-GENE-081104-195
Gene Name: ring finger protein 220b
Gene Symbol: rnf220b    Nomenclature History

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Previous Name: si:ch211-241d21.7

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 8 Mapping Details/Browsers
Description: Predicted to have metal ion binding activity and ubiquitin-protein transferase activity. Orthologous to human RNF220 (ring finger protein 220).
Genome Resources: Alliance (1),  Ensembl(GRCz11):ENSDARG00000075183 (2)
GENE EXPRESSION No data available
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la016277Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • la016278Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • la026376Tg Transgenic Insertion Unknown Unknown DNA
    sa27161 Point Mutation Unknown Splice Site ENU
    sa31641 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sdu25 Small Deletion Exon 3 Unknown CRISPR
    Sequence Targeting Reagents
    Targeting Reagent Created Alleles Publications
    CRISPR1-rnf220b 1
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH rnf220b HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH rnf220b VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Molecular Function metal ion binding (more)
    GO Terms (all 2)
    PROTEIN FAMILIES, DOMAINS AND SITES
    Type InterPro ID Name
    Domain IPR001841 Zinc finger, RING-type
    Homologous_superfamily IPR013083 Zinc finger, RING/FYVE/PHD-type
    Domain IPR031824 E3 ubiquitin-protein ligase RNF220, middle domain
    Domain IPR040178 E3 ubiquitin-protein ligase RNF220, RING finger
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA rnf220b-201 (1)    Ensembl 1108
    rnf220b-202 (1)    Ensembl 3450
    Browsers: EnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM rnf220b No data available
    MARKER RELATIONSHIPS
    rnf220b Contained in: [BAC] CH211-223N5 (1), CH211-241D21 (1), CH211-284D14 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    Genomic GenBank:CT025742 (1) 179951 bp
    Select Tool
    Polypeptide UniProtKB:A0A2R8RRJ2 (1) 362 aa
    Sequence Information (all 6)
    ORTHOLOGY for rnf220b ( Chr: 8 )
    CITATIONS (18)