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ZIRC
ZFIN ID: ZDB-GENE-081104-169
Gene Name: von Willebrand factor C domain containing 2 like
Gene Symbol: vwc2l
Sequence Ontology ID : SO:0001217

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Previous Names: brorin-like (1), si:ch211-207d8.1 (1)

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(Including Attributions)
Location: Chr: 9 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Involved in nervous system development. Predicted to localize to the AMPA glutamate receptor complex and extracellular space. Is expressed in forebrain; hindbrain; and midbrain. Orthologous to human  ...
GENE EXPRESSION
All Expression Data: Fig. 5 from Miwa et al., 2009
Wild-type Stages, Structures: Pharyngula:Prim-5 (24.0h-30.0h) to Pharyngula:Prim-25 (36.0h-42.0h)
 
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la026981Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa16824 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Targeting reagents:
    DISEASE ASSOCIATED WITH vwc2l HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH vwc2l VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process nervous system development (more)
    Cellular Component cell junction (more)
    GO Terms (all 8)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR001007 (1)
  • PROSITE:PS01208 (1)
  • PROSITE:PS50184 (1)
  • Pfam:PF00093 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA vwc2l-201 (1) 896
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM vwc2l No data available
    MARKER RELATIONSHIPS
    vwc2l Contained in: [BAC] CH211-207D8 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001128564 (1)
    Genomic GenBank:CR753890 (1) 201771 bp Blast at MegaBLAST
    Polypeptide UniProtKB:B0UZC8 (1) 223 aa
    Sequence Clusters UniGene:148397 (1)
    Sequence Information (all 9)
    ORTHOLOGY for vwc2l ( Chr: 9 )
    CITATIONS (20)