ZFIN ID: ZDB-GENE-081028-60
Gene Name: attractin-like 1a
Gene Symbol: atrnl1a    Nomenclature History

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Previous Name: si:ch211-270n8.2

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 13 Mapping Details/Browsers
Description: Predicted to be involved in animal organ morphogenesis and tissue development. Predicted to localize to the integral component of membrane. Orthologous to human ATRNL1 (attractin like 1).
Genome Resources: Alliance (1),  Ensembl(GRCz11):ENSDARG00000077188 (2)
GENE EXPRESSION No data available
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa10875 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa10964 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa12259 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa12330 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa12385 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa14748 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa14797 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa17103 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa22271 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa22272 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa42177 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa42178 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH atrnl1a HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH atrnl1a VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process animal organ morphogenesis (more)
    Cellular Component integral component of membrane (more)
    GO Terms (all 4)
    PROTEIN FAMILIES, DOMAINS AND SITES
    Type InterPro ID Name
    Domain IPR000742 EGF-like domain
    Domain IPR000859 CUB domain
    Domain IPR001304 C-type lectin-like
    Domain IPR002049 Laminin EGF domain
    Repeat IPR002165 Plexin repeat
    Repeat IPR006652 Kelch repeat type 1
    Homologous_superfamily IPR011043 Galactose oxidase/kelch, beta-propeller
    Conserved_site IPR013032 EGF-like, conserved site
    Homologous_superfamily IPR015915 Kelch-type beta propeller
    Homologous_superfamily IPR016186 C-type lectin-like/link domain superfamily
    Homologous_superfamily IPR016187 C-type lectin fold
    Domain IPR016201 PSI domain
    Homologous_superfamily IPR035914 Spermadhesin, CUB domain superfamily
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA atrnl1a-202 (1)    Ensembl 2438
    Browsers: EnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM atrnl1a No data available
    MARKER RELATIONSHIPS
    atrnl1a Contained in: [BAC] CH211-197G14 (1), CH211-270N8 (1), DKEY-262M8 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    Genomic GenBank:CR762487 (1) 219918 bp Blast at MegaBLAST
    Polypeptide UniProtKB:F1Q4X2 (1) 1400 aa
    Sequence Information (all 5)
    ORTHOLOGY for atrnl1a ( Chr: 13 )
    CITATIONS (12)