ZFIN ID: ZDB-GENE-081022-196
Gene Name: zgc:195212
Gene Symbol: zgc:195212
Sequence Ontology ID : SO:0000704

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(Including Attributions)
Location: Chr: 14 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to be involved in meiotic DNA double-strand break formation; orthologous to human C11orf80 (chromosome 11 open reading frame 80).

Nomenclature Note: This gene is characterized by full length cDNAs isolated as part of the Zebrafish Gene Collection (ZGC). When more is known about the gene, the current nomenclature will be replaced with more traditional zebrafish gene nomenclature. The prefix `zgc:' indicates that this gene is represented by cDNAs generated by the ZGC project.

GENE EXPRESSION No data available
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa35749 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa42440 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH zgc:195212 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH zgc:195212 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process meiotic DNA double-strand break formation (more)
    Cellular Component cellular_component (more)
    Molecular Function molecular_function (more)
    GO Terms (all 3)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR028040 (1)
  • Pfam:PF15091 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA zgc:195212-202 (1) 1864
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM zgc:195212 No data available
    MARKER RELATIONSHIPS
    zgc:195212Contained in: [BAC] DKEY-109L4 (1) (order this)
    zgc:195212Encodes: [cDNA] MGC:195212 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001135145 (1) 1386bp
    Genomic GenBank:CT573279 (1) 264426bp Blast at MegaBLAST
    Polypeptide UniProtKB:A0A140LGQ5 (1) 562aa
    Sequence Clusters UniGene:117773 (1)
    Sequence Information (all 11)
    OTHER zgc:195212 GENE PAGES
  • Alliance (1)
  • Gene:100189619 (1)
  • VEGA:OTTDARG00000043280 (1)
  • Ensembl(GRCz11):ENSDARG00000075203 (1)
  • ORTHOLOGY for zgc:195212 (Chr: 14)
    CITATIONS (11)