Gene

vps54

ID
ZDB-GENE-081022-176
Name
VPS54 subunit of GARP complex
Symbol
vps54 Nomenclature History
Previous Names
  • zgc:195037
Type
protein_coding_gene
Location
Chr: 1 Mapping Details/Browsers
Description
Is predicted to enable syntaxin binding activity. Involved in Golgi to vacuole transport and retrograde transport, endosome to Golgi. Acts upstream of or within protein transport. Predicted to be located in Golgi apparatus. Predicted to be part of GARP complex. Orthologous to human VPS54 (VPS54 subunit of GARP complex).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
No data available
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With vps54 Human Ortholog
No data available
Associated With vps54 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR012501 Vacuolar protein sorting-associated protein 54, C-terminal
Domain IPR019515 Vacuolar protein sorting-associated protein 54, N-terminal
Family IPR039745 Vacuolar protein sorting-associated protein 54
Domain Details Per Protein
Protein Length Vacuolar protein sorting-associated protein 54 Vacuolar protein sorting-associated protein 54, C-terminal Vacuolar protein sorting-associated protein 54, N-terminal
UniProtKB:A0A0R4IME0 170
UniProtKB:B3DJK6 998
UniProtKB:A0A0R4IIL8 799
UniProtKB:A0A0R4IA59 998
UniProtKB:A0A0R4IQF8 1031
Transcripts
Genome Browsers
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations