ZFIN ID: ZDB-GENE-081022-106
Gene Name: lecithin retinol acyltransferase b, tandem duplicate 2
Gene Symbol: lratb.2    Nomenclature History

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Previous Names: zgc:194355, zgc:194371

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 1 Mapping Details/Browsers
Description: Predicted to have phosphatidylcholine-retinol O-acyltransferase activity. Predicted to be involved in retinol metabolic process. Predicted to localize to integral component of membrane.
Genome Resources: Alliance (1),  Gene:556575 (1),  Ensembl(GRCz11):ENSDARG00000077652 (1)
GENE EXPRESSION
All Expression Data: Fig. 4 from Jiang et al., 2016
Wild-type Stages, Structures: Larval:Day 4 (96.0h-120.0h) to Larval:Day 4 (96.0h-120.0h)
 
High Throughput Expression: Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa10285 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • zko215a Small Deletion Unknown Unknown CRISPR
  • China Zebrafish Resource Center (CZRC) (order this)
  • zko215b Indel Unknown Unknown CRISPR
  • China Zebrafish Resource Center (CZRC) (order this)
  • Sequence Targeting Reagents
    Targeting Reagent Created Alleles Publications
    CRISPR1-lratb.2 1
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH lratb.2 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH lratb.2 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process retinol metabolic process (more)
    Cellular Component integral component of membrane (more)
    Molecular Function phosphatidylcholine-retinol O-acyltransferase activity (more)
    GO Terms (all 6)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA lratb.2-201 (1)    Ensembl 1117
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM lratb.2 No data available
    MARKER RELATIONSHIPS
    lratb.2 Contained in: [BAC] CH73-132F6 (1)
    lratb.2 Encodes: [cDNA] MGC:194355 (1), MGC:194371 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:NM_001135971 (1) 822 nt
    Genomic GenBank:CU861508 (1) 66282 nt
    Select Tool
    Polypeptide UniProtKB:R4GDW9 (1) 243 aa
    Sequence Information (all 11)
    ORTHOLOGY for lratb.2 ( Chr: 1 )
    CITATIONS (16)