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ZIRC
ZFIN ID: ZDB-GENE-080725-1
Gene Name: SRY-box transcription factor 18
Gene Symbol: sox18
Sequence Ontology ID : SO:0001217

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Previous Name: si:ch211-235f6.2 (1)

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(Including Attributions)
Location: Chr: 23 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have DNA-binding transcription factor activity, RNA polymerase II-specific. Involved in artery development; lymphangiogenesis; and vasculogenesis. Predicted to localize to the nuclear  ...
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
hu10320 Insertion Unknown Unknown TALEN
sa12315 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Targeting reagents:
    DISEASE ASSOCIATED WITH sox18 HUMAN ORTHOLOG
    Disease Ontology Term OMIM Term OMIM Phenotype ID
    hypotrichosis-lymphedema-telangiectasia syndrome Hypotrichosis-lymphedema-telangiectasia syndrome 607823
    hypotrichosis-lymphedema-telangiectasia-renal defect syndrome Hypotrichosis-lymphedema-telangiectasia-renal defect syndrome 137940
    DISEASE ASSOCIATED WITH sox18 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process artery development (more)
    Cellular Component nucleus (more)
    Molecular Function DNA binding (more)
    GO Terms (all 10)
    TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA sox18-201 (1) 1530
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM sox18 No data available
    MARKER RELATIONSHIPS
    sox18 Contained in: [BAC] CH211-235F6 (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:XM_017353772 (1)
    Genomic GenBank:CR457456 (1) 146468 bp
    Select Tool
    Polypeptide UniProtKB:E7F9I2 (1) 431 aa
    Sequence Clusters UniGene:88332 (1)
    Sequence Information (all 9)
    ORTHOLOGY for sox18 ( Chr: 23 )
    CITATIONS (47)