ZFIN ID: ZDB-GENE-080723-30
Gene Name: UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 18a
Gene Symbol: galnt18a    Nomenclature History

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Previous Names: galntl4a, zgc:194153

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 25 Mapping Details/Browsers
Description: Predicted to have carbohydrate binding activity and transferase activity, transferring glycosyl groups. Predicted to be involved in protein glycosylation. Predicted to localize to the Golgi apparatus. Is expressed in several structures, including blastomere; brain; notochord; optic cup; and post-vent region. Orthologous to human GALNT18 (polypeptide N-acetylgalactosaminyltransferase 18).
Genome Resources: Alliance (1),  Gene:100170813 (1),  Ensembl(GRCz11):ENSDARG00000100889 (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la023181Tg Transgenic Insertion Unknown Unknown DNA
la023182Tg Transgenic Insertion Unknown Unknown DNA
la028679Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • la028680Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa24644 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa32525 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH galnt18a HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH galnt18a VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process protein glycosylation (more)
    Cellular Component Golgi apparatus (more)
    Molecular Function carbohydrate binding (more)
    GO Terms (all 8)
    PROTEIN FAMILIES, DOMAINS AND SITES
    Type InterPro ID Name
    Domain IPR000772 Ricin B, lectin domain
    Domain IPR001173 Glycosyltransferase 2-like
    Homologous_superfamily IPR029044 Nucleotide-diphospho-sugar transferases
    Homologous_superfamily IPR035992 Ricin B-like lectins
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA galnt18a-201 (1)    Ensembl 2601
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM galnt18a No data available
    MARKER RELATIONSHIPS
    galnt18a Contained in: [BAC] CH211-176L24 (1), DKEY-44K1 (1) (order this), DKEY-77O15 (1) (order this)
    galnt18a Encodes: [cDNA] MGC:194153 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001130648 (1) 1964 bp
    Genomic GenBank:AL844894 (1) 220237 bp Blast at MegaBLAST
    Polypeptide UniProtKB:A0A0R4IGF6 (1) 697 aa
    Sequence Information (all 17)
    ORTHOLOGY for galnt18a ( Chr: 25 )
    CITATIONS (23)