ZFIN ID: ZDB-GENE-080723-27
Gene Name: troponin T type 1 (skeletal, slow)
Gene Symbol: tnnt1
Sequence Ontology ID : SO:0000704

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Previous Names: zgc:193831, zgc:193865

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(Including Attributions)
Location: Chr: 3 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
All Expression Data: 2 figures from 2 publications
Wild-type Stages, Structures: Pharyngula:Prim-5 (24.0h-30.0h) to Hatching:Long-pec (48.0h-60.0h)
  muscle, slow muscle cell striated muscle thin filament
MUTATIONS AND SEQUENCE TARGETING REAGENTSNo data available
PHENOTYPE No data available
DISEASE ASSOCIATED WITH tnnt1 HUMAN ORTHOLOG
Disease Ontology Term OMIM Term OMIM Phenotype ID
nemaline myopathy 5 Nemaline myopathy 5, Amish type 605355
GENE ONTOLOGY
Ontology GO Term
Biological Process regulation of muscle contraction (more)
Cellular Component troponin complex (more)
GO Terms (all 2)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR001978 (1)
  • InterPro:IPR027707 (1)
  • Pfam:PF00992 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA tnnt1-001 (1) 1053
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM tnnt1 No data available
    MARKER RELATIONSHIPS
    tnnt1Contained in: [BAC] DKEY-16P21 (1) (order this)
    tnnt1Encodes: [cDNA] MGC:193831 (1), MGC:193865 (1)
    tnnt1Has Artifact: [cDNA] MGC:109705 (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001128695 (1) 910bp
    Genomic GenBank:BX511021 (1) 235632bp Blast at MegaBLAST
    Polypeptide UniProtKB:B3DG30 (1) 268aa
    Sequence Clusters UniGene:86821 (1)
    Sequence Information (all 19)
    OTHER tnnt1 GENE PAGES
  • Alliance (1)
  • Gene:558627 (1)
  • VEGA:OTTDARG00000019971 (1)
  • Ensembl(GRCz10):ENSDARG00000037954 (1)
  • ORTHOLOGY for tnnt1 (Chr: 3)
    CITATIONS (18)