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General Information
ZIRC
ZFIN ID: ZDB-GENE-080618-2
Gene Name: PR domain containing 1b, with ZNF domain
Gene Symbol: prdm1b
Sequence Ontology ID : SO:0001217

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(Including Attributions)
Location: Chr: 19 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have DNA-binding transcription factor activity; RNA polymerase II regulatory region sequence-specific DNA binding activity; and chromatin DNA binding activity. Predicted to localize to  ...
GENE EXPRESSION
All Expression Data: 2 figures from Sun et al., 2008
Wild-type Stages, Structures: Cleavage:2-cell (0.75h-1.0h) to Hatching:Long-pec (48.0h-60.0h)
 
PHENOTYPE No data available
DISEASE ASSOCIATED WITH prdm1b HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH prdm1b VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process cell fate commitment (more)
Cellular Component cytoplasm (more)
Molecular Function chromatin DNA binding (more)
GO Terms (all 8)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR001214 (1)
  • PROSITE:PS50280 (1)
  • Pfam:PF00856 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA prdm1b-001 (1) 8241
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM prdm1b No data available
    MARKER RELATIONSHIPS
    prdm1b Contained in: [BAC] CH73-381H8 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:XM_021468195 (1)
    Genomic GenBank:CU693379 (1) 71405 bp
    Select Tool
    Polypeptide UniProtKB:A0A2R8Q3S6 (1) 471 aa
    Sequence Clusters UniGene:145157 (1)
    Sequence Information (all 19)
    ORTHOLOGY for prdm1b ( Chr: 19 )
    CITATIONS (11)