ZFIN ID: ZDB-GENE-080616-1
Gene Name: PR domain containing 13
Gene Symbol: prdm13    Nomenclature History

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 16 Mapping Details/Browsers
Description: Predicted to have histone methyltransferase activity. Predicted to be involved in regulation of gene expression. Predicted to localize to nucleus. Is expressed in nervous system. Orthologous to human PRDM13 (PR/SET domain 13).
Genome Resources: Alliance (1),  Gene:796276 (1),  Ensembl(GRCz11):ENSDARG00000078701 (2)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa11161 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa16464 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa32101 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Sequence Targeting Reagents
    Targeting Reagent Created Alleles Publications
    MO1-prdm13 N/A 1
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH prdm13 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH prdm13 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process regulation of gene expression (more)
    Cellular Component nucleus (more)
    Molecular Function metal ion binding (more)
    GO Terms (all 4)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA prdm13-201 (1)    Ensembl 2671
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM prdm13 No data available
    MARKER RELATIONSHIPS
    prdm13 Contained in: [BAC] DKEY-165N16 (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:NM_001326454 (1)
    Genomic GenBank:CR848819 (1) 215554 nt Blast at MegaBLAST
    Polypeptide UniProtKB:F1R7D7 (1) 614 aa
    Sequence Information (all 9)
    ORTHOLOGY for prdm13 ( Chr: 16 )
    CITATIONS (18)