ZFIN is now using GRCz12tu for Genomic Data
Gene
prdm2b
- ID
- ZDB-GENE-080613-3
- Name
- PR domain containing 2, with ZNF domain b
- Symbol
- prdm2b Nomenclature History
- Previous Names
-
- prdm2
- wu:fc49e10
- Type
- protein_coding_gene
- Location
- Chr: 11 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to act upstream of or within methylation. Predicted to be active in nucleus. Orthologous to human PRDM2 (PR/SET domain 2).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 1 figure from Sun et al., 2008
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
Domain Details Per Protein
| Protein | Additional Resources | Length | PRDM2, PR/SET domain | SET domain | SET domain superfamily | Zinc finger | Zinc finger C2H2 superfamily | Zinc finger C2H2-type |
|---|---|---|---|---|---|---|---|---|
| UniProtKB:F1QGQ8 | InterPro | 1792 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
prdm2b-201
(1)
|
Ensembl | 5,379 nt | ||
| mRNA |
prdm2b-202
(1)
|
Ensembl | 7,204 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers