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General Information
ZIRC
ZFIN ID: ZDB-GENE-080509-2
Gene Name: SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3b
Gene Symbol: smarcd3b
Sequence Ontology ID : SO:0000704

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Attributions

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Previous Names: smarcd3 (1), smarcd3l

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(Including Attributions)
Location: Chr: 7 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Involved in cardiac muscle cell differentiation; determination of left/right symmetry; and heart morphogenesis. Predicted to localize to the SWI/SNF complex; nBAF complex; and npBAF complex.  ...
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la010513Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa12191 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa12626 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Targeting reagents:
    PHENOTYPE
    Data: 3 figures from 2 publications
    Observed in:
    DISEASE ASSOCIATED WITH smarcd3b HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH smarcd3b VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process cardiac muscle cell differentiation (more)
    Cellular Component nBAF complex (more)
    GO Terms (all 6)
    TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA smarcd3b-201 (1) 1533
    smarcd3b-202 (1) 533
    smarcd3b-203 (1) 4256
    smarcd3b-204 (1) 1417
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM smarcd3b No data available
    MARKER RELATIONSHIPS
    smarcd3bContained in: [BAC] CH211-198H5 (1) (order this), DKEY-10F23 (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001127306 (1) 1431bp
    Genomic GenBank:BX005319 (1) 225639bp Blast at MegaBLAST
    Polypeptide UniProtKB:F6NVB1 (1) 510aa
    Sequence Clusters UniGene:28422 (1)
    Sequence Information (all 20)
    ORTHOLOGY for smarcd3b (Chr: 7)
    CITATIONS (25)